Anonymization
Ear/dental/skull-feature removal
Remove ear, dental, and skull features that could enable 3D reconstruction.
Problem
Head CT scans may reveal identifiable facial features — ears, dental work, or skull contours — that can be used for biometric re-identification. Standard face defacing removes the facial surface, but ears and dental structures require additional targeted removal for complete de-identification.
Steps
- Open a head CT/MR scan — click Open files… (⌘O).
- Switch to Anonymization mode — click the Anon tab (⌘2).
- Run auto-defacing — click Auto-Deface. The tool proposes redaction regions for Face, Left Ear, and Right Ear (3 regions total).
- Verify ear coverage — confirm both ear regions fully cover the auricular structures in the axial views. Adjust bounding boxes manually if needed using the redact tool.
- Dental/skull removal — for scans where dental work is visible, manually draw additional redaction regions over the mandible/maxilla area.
- Apply and export — click Apply & Export. The exported DICOM has all soft-tissue identifying features blacked out from the pixel data.
Result
Auto-defacing proposes face and both-ear regions that cover the identifiable surface features; exported pixel data shows black rectangles there while diagnostic brain tissue outside the boxes is unchanged. Add manual boxes to supplement the proposals as needed.